Data Science Core Facility

The WV-INBRE Data Science Core provides access to cutting-edge AI platforms and computational tools for biomedical research. We specialize in multi-omics analysis, single-cell data translation, and biological network analysis through our partnership with leading computational biology platforms.

Core Services

Access to advanced AI and machine learning platforms

Multi-omics data analysis and integration

Single-cell RNA-seq and ATAC-seq analysis

Biological knowledge base and network analysis

Training on cutting-edge computational tools

Data science consultation and support

Full-Service Workflow

Step 1

Initial Consultation

Meet with Data Science Core staff to formulate experimental design and discuss computational needs

1-2 meetings

Step 2

Project & Grant Planning

Receive expected outcomes, cost quote, and estimated time to completion for analysis

Within 1 week

Step 3

Service Execution

Core performs data analysis, AI/ML modeling, or provides computational resources

Varies by project

Step 4

Data Review

Core staff meets with investigator to review results, interpret findings, and address concerns

1-2 meetings

AI Platforms & Tools

G2PDeep Platform

AI Platform

Access Tool

Multi-omics phenotype prediction and marker discovery using deep learning

Deep learning for multi-omics integrationAutomated hyperparameter tuningBiomarker discovery and visualizationGene Set Enrichment Analysis (GSEA)

crossMP Platform

AI Platform

Access Tool

Cross-modality translation between single-cell RNA-seq and single-cell ATAC-seq data

Deep neural network modeling for modality translationUpload one modality, predict the otherSingle-cell multi-omics integrationWeb-based portal with intuitive interface

KBCommons

Knowledge Base

Access Tool

Knowledge Base Commons for biological data integration, sharing, and community-driven annotation

Integrated biological databases and knowledge graphsData sharing and collaboration toolsStandardized data formats and ontologiesCommunity annotation and curation features

IRNet

Network Analysis Tool

Access Tool

Interaction Network analysis tools and databases for regulatory and protein networks

Protein-protein interaction networksGene regulatory networks and pathway analysisNetwork visualization and analysis toolsComparative network analysis across species

View All Bioinformatics Tools